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Implementing Electronic Signature
Requirements in an existing LC-MS/MS Data Processing & Reporting System
Robert A. Bethem, John W. Cornacchia, Scott Serl, Shelly Weagraff and Jo Marie Smolec
Alta Analytical Laboratory
Ike D. Tabani
Innovative Automation
Presented at the 47th ASMS Conference on Mass Spectrometry and Allied Topics,
June 13 - 17, 1999, Dallas, TX.
Click Here to View
Online Poster (Note: Requires Adobe Acrobat Reader 3.0+)
Contract research organizations (CRO) operating
under FDA-GLP are faced with two opposing challenges; maintaining high productivity and
compliance with the evolving regulatory electronic record-keeping requirements. Over the
past ten years, LCMS laboratory managers have steadily improved laboratory productivity
via automation of data acquisition and reporting. The drive towards laboratory automation
and compliance with electronic record keeping is converging to define a common platform
necessary to achieve the paperless CRO. FDA has recently presented guidance
regarding electronic record keeping requirements issued in Part 11; Electronic Records;
Electronic Signatures (21 CFR 11)1,2 . The purpose of Part 11 was to address the electronic record keeping and
signature requirements in "Paperless Record Systems". Some of the key
requirements for regulated systems include: - Validation - Ability to Generate Accurate
and Complete Copies - Archival Protection of Records - Audit Trails - System Controls -
Personnel Training and Qualifications ALTA has incorporated the electronic record keeping
and signature procedures into ALIS98, an LCMS report writer3-5 that are required of regulated
systems. The purpose of this presentation is to describe our approach to implementing
these new features including an electronic audit trail, encrypted electronic signatures
and enhanced system controls towards satisfying the FDA requirements. Much of the design
considerations were based on information presented at the 1998 SQA Workshop (Alexandria,
VA) as well as presentations available at the FDA web site (http://www.fda.gov). We invite
discussions with others who supply FDA with equivalent data as to how they accomplish the
same goal.
References 1. Electronic
Records; Electronic Signatures; Final Rule (21 CFR Part 11). 2. The FDA Inspection
Program. J. McCormack (FDA). Presented at the SQA Workshop Advanced QA Techniques, July
10, 1998. Alexandria, VA. 3. ALIS98 Users Manual. Innovative Automation. 1998. 4.
Evaluation of the Effect of Regression Model Selection on Quantitative LC-MS/MS Data.
Robert A. Bethem, John W. Cornacchia, Elaine K. Fukuda, Alen Chan and Ike D.
Tabani.
Presented at the 45th ASMS Conference on Mass Spectrometry and Allied Topics, 1997. 5.
ALIS-DMA/DMPRA: A New LC/MS Pharmaceutical and Agrochemical Data Report Writer. Ike D.
Tabani, John W. Cornacchia and Robert A. Bethem. Presented at the 44th ASMS Conference on
Mass Spectrometry and Allied Topics, May 12 - 16, 1996. |
Method Validation Report Generation
Using MS-Word97 Automation
John W. Cornacchia, Scott Serl, Jeri. M. Willoh, Mike B. Buonarotti and Robert A.
Bethem,
Alta Analytical Laboratory
Ike D. Tabani and Mikhail Amchislavsky
Innovative Automation
Presented at the 10th International Symposium on Pharmaceutical and Biomedical
Analysis, Washington, DC
May 9 - 12, 1999.
Click Here to View Online Poster
(Note: Requires Adobe Acrobat Reader 3.0+)
Method validation studies require processing of
method performance experimental data and generation of custom analytical reports.
Although there is some similarity between validation plans, (contract research
organization) CRO's typically see considerable variation in design due to compound and
sponsor driven requirements. In addition to differences in experimental design,
method validation report formats are often dictated by sponsor (versus CRO) standard
operating procedures (SOP). These factors complicate any efforts to streamline
report generation via software automation.
One
approach towards providing a flexible reporting tools to study managers has been the
utilization of MS Office97 automation. The advantage of this approach is that MS
Word97 is used throughout many if not all pharmaceutical companies and FDA. Tracking
and processing of method validation trial results can be handled by a MS-Access97 database
and user interface constructed with MS-Visual Basic (Visual Basic or Visual Basic
for Applications). Report data can be queried and written into a pre-designed and
preformatted MS Word97 document templates using Access97 -SQL via MS DAO (Data
Access Object) library version 3.5. Besides enabling rapid application development,
report writers also benefit from using a validated significant figure subroutines to
ensure consistent numerical formatting. This poster describes the method validation
report writing module developed for ALIS-98, a LC-MS/MS data management and reporting
system. |
Evaluation of the Effect of
Regression Model Selection on Quantitative LC-MS/MS Data
Robert A. Bethem, John W. Cornacchia
Alta Analytical Laboratory
Elaine K. Fukuda
CAFT Mass Spectrometry Facility, Rutgers University, New Brunswick, NJ.
Ike D. Tabani and Alen Chan
Innovative Automation
Presented at the 45th ASMS Conference on Mass Spectrometry and Allied Topics,
1997, Palm Springs, CA
Click Here to View Online Poster
(Note: Requires Adobe Acrobat Reader 3.0+)
Purpose: To evaluate
the effects of regression model selection on statistical measures traditionally used to
assess quantitative data set acceptability including bias of standards, r2 and
QC percent recovery.
Method: LCMS/MS data
from a single dose safety and pharmacokinetic study was evaluated using the LCMS Report
Writer, ALIS-DMPRA 4.0. Designs details of ALIS including a description of functionalities
has been presented elsewhere . The data which consisted of five analytical runs and 16
subjects were generated on a PE-Sciex API III + operating in turbo-ionspray tandem mass
spectrometry mode. Standard concentrations ranged over three orders of magnitude (0.005 -
5.0 ng/mL). Calibration sets were processed using weighted, non-weighted, linear,
quadratic regression and log-log quadratic regression. All regression calculations were
performed using the ALIS Calibration Optimizer module and verified by Jandel's TableCurve
4.0 for Windows (Figure 1).
The coefficient of determination (r2) and the fit standard error were used to
assess good-ness of fit for each calibration curve-regression model combination. In
addition, the bias of the lowest calibration standards and QC samples were determined to
examine the effect of curve fit on data acceptability. Subject data were processed within
the ALIS Pharmacokinetic/SGI Data Analysis module to generate t 1/2 for all subjects and
three PK models: zero-order, first-order and compartment independent. To compare the
results across regression types, the relative percent difference was calculated using the
t 1/2 from the weighted linear regression 1/x2 as a reference point.
Results: These results suggest curve fit selection
should be based on a goodness of fit measure such as Standard Error (Root MSE). In this
study, regression model selection had a significant effect on the bias of standards and QC
samples.
Conclusion: Future work should examine procedures
for outlier selection and rejection. |
ALIS-DMA/DMPRA: A New LC/MS
Pharmaceutical and Agrochemical Data Report Writer
Ike D. Tabani
Innovative Automation
John W. Cornacchia and Robert A. Bethem.
Alta Analytical Laboratory
Presented at the 44th ASMS Conference on Mass Spectrometry and Allied Topics,
May 12 - 16, 1996, Portland OR.
Click Here to View Online Poster
(Note: Requires Adobe Acrobat Reader 3.0+)
The use of high speed automated analytical
procedures such as LC/MS/MS in support of FDA/EPA data submissions has markedly increased
over the past five years. Instrument through-put can easily exceed several hundred result
records per analytical run creating the need for software capable of performing real-time
post-acquisition data processing and report generation. LCMS based pharmacokinetic reports
and field dissipation reports are typically method or protocol specific requiring a high
degree of flexibility in the design of the report writer software. ALIS, a windows based
LCMS report writer, allows the creation of study specific sample log-in screens,
electronic benchsheets, and report forms customizable through an extensive set of user
utilities. The ALIS report writer currently supports automated data transfer from two
instrument platforms: the Finnigan XSQ 700/7000 and the Sciex API 3/300.
ALIS employs two template builders to facilitate the collection and
processing of data based on study specific requirements. Method templates are created that
dictate sample preparation and instrument operation parameters. Post-acquisition
quantitation options are also assigned to the method template including the type of
calibration curve fifting, sample response types and any result correction factors that
will be applied to the data. The use of method templates greatly reduces laboratory errors
due to method deviations and promotes the generation of a uniform study database.
To accommodate as many study types as possible, the ALIS
user interface allows the alteration of the underlying sample descriptor database
structure by the user. Allowing the user to create study specific sample log-in templates
has enabled a high degree of flexibility in the back-end grouping and sorting of
analytical results. Post processed data can be stored in MS Access, Oracle or any RDBMS
capable of supporting ODBC. In the case of MS Office based ALIS, results data sets can be
queried from Access using SQL, stored query definitions or through thin the above third
party report writers. |
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